PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN34446.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bHLH
Protein Properties Length: 171aa    MW: 19507.4 Da    PI: 7.0977
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN34446.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH36.96.3e-12143754
                HHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
         HLH  7 erErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54
                ++ErrRR+r+N++++ Lr+++Pk +      K++  +iL  +++Y+k+L
  KHN34446.1  1 MAERRRRKRLNDRLSMLRSIVPKiS------KMDRTSILGDTIDYMKEL 43
                58*********************66......****************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088815.288143IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003538.8E-11149IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.106.6E-15156IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000832.26E-4147No hitNo description
PfamPF000101.2E-9143IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474592.09E-14154IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd048735.42E-493156No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0055114Biological Processoxidation-reduction process
GO:0032440Molecular Function2-alkenal reductase [NAD(P)] activity
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 171 aa     Download sequence    Send to blast
MAERRRRKRL NDRLSMLRSI VPKISKMDRT SILGDTIDYM KELLERIGKL QEEEMEEGTN  60
RINLLGISKE LKPNEVMVRN SPKFDVERRD QDTRISICCA TKPGLLLSTV NTLEALGLEI  120
HQCVISSFND FSIQASCSEV AEQRNCMSQE EIKQALFRNA GYGEASVQNV P
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
129ERRRRKRL
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0944230.0BT094423.1 Soybean clone JCVI-FLGm-18L15 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_001241949.11e-112uncharacterized protein LOC100784145
SwissprotQ9LSL12e-78BH093_ARATH; Transcription factor bHLH93
TrEMBLA0A0B2RIM01e-123A0A0B2RIM0_GLYSO; Transcription factor bHLH93
STRINGGLYMA09G33590.11e-113(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF118634103
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G65640.13e-79beta HLH protein 93
Publications ? help Back to Top
  1. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]